Index _ | A | C | D | E | F | G | H | I | J | K | L | M | N | O | P | R | S | T | U | W | Z _ __annotations__ (zensols.mimicsid.domain.MimicSectionError attribute) (zensols.mimicsid.model.EmptyPredictionError attribute) (zensols.mimicsid.model.PredictionError attribute) __init__() (zensols.mimicsid.anon.AnnotatedNoteStash method) (zensols.mimicsid.anon.AnnotationNoteFactory method) (zensols.mimicsid.anon.AnnotationResource method) (zensols.mimicsid.anon.NoteStash method) (zensols.mimicsid.app.Application method) (zensols.mimicsid.app.PredictionApplication method) (zensols.mimicsid.cli.ApplicationFactory method) (zensols.mimicsid.dapp.DistApplication method) (zensols.mimicsid.domain.AnnotatedNote method) (zensols.mimicsid.domain.AnnotatedSection method) (zensols.mimicsid.domain.MimicPredictedNote method) (zensols.mimicsid.domain.MimicSectionAssertError method) (zensols.mimicsid.domain.PredictedNote method) (zensols.mimicsid.model.EmptyPredictionError method) (zensols.mimicsid.model.SectionDataPoint method) (zensols.mimicsid.model.SectionFacade method) (zensols.mimicsid.model.SectionPredictionMapper method) (zensols.mimicsid.pred.PredictionNoteFactory method) (zensols.mimicsid.pred.SectionPredictor method) __module__ (zensols.mimicsid.domain.MimicSectionAssertError attribute) (zensols.mimicsid.domain.MimicSectionError attribute) (zensols.mimicsid.model.EmptyPredictionError attribute) (zensols.mimicsid.model.PredictionError attribute) A admission_notes() (zensols.mimicsid.app.Application method) adult (zensols.mimicsid.domain.AgeType attribute) age_type (zensols.mimicsid.domain.AnnotatedNote property) AgeType (class in zensols.mimicsid.domain) annotated_note_section (zensols.mimicsid.anon.AnnotationNoteFactory attribute) AnnotatedNote (class in zensols.mimicsid.domain) AnnotatedNoteStash (class in zensols.mimicsid.anon) AnnotatedSection (class in zensols.mimicsid.domain) annotation (zensols.mimicsid.domain.AnnotatedNote attribute) (zensols.mimicsid.domain.AnnotatedSection attribute) annotation_resource() (zensols.mimicsid.cli.ApplicationFactory class method) AnnotationNoteFactory (class in zensols.mimicsid.anon) AnnotationResource (class in zensols.mimicsid.anon) anon_resource (zensols.mimicsid.anon.AnnotatedNoteStash attribute) (zensols.mimicsid.anon.AnnotationNoteFactory attribute) (zensols.mimicsid.app.Application attribute) (zensols.mimicsid.dapp.DistApplication attribute) Application (class in zensols.mimicsid.app) ApplicationFactory (class in zensols.mimicsid.cli) auto_deallocate (zensols.mimicsid.pred.SectionPredictor attribute) C CAPITAL (zensols.mimicsid.model.TokenType attribute) category_to_id() (zensols.mimicsid.anon.AnnotationResource static method) clear() (zensols.mimicsid.anon.AnnotatedNoteStash method) (zensols.mimicsid.app.Application method) COLON (zensols.mimicsid.model.TokenType attribute) config_factory (zensols.mimicsid.app.Application attribute) (zensols.mimicsid.app.PredictionApplication attribute) (zensols.mimicsid.pred.PredictionNoteFactory attribute) (zensols.mimicsid.pred.SectionPredictor attribute) corpus (zensols.mimicsid.anon.AnnotatedNoteStash attribute) (zensols.mimicsid.anon.NoteStash attribute) (zensols.mimicsid.app.Application attribute) corpus() (zensols.mimicsid.cli.ApplicationFactory class method) corpus_path (zensols.mimicsid.anon.AnnotationResource property) create() (zensols.mimicsid.anon.AnnotationNoteFactory method) cuis (zensols.mimicsid.model.SectionDataPoint property) D deallocate() (zensols.mimicsid.pred.SectionPredictor method) DIGIT (zensols.mimicsid.model.TokenType attribute) DistApplication (class in zensols.mimicsid.dapp) doc (zensols.mimicsid.domain.PredictedNote attribute) (zensols.mimicsid.model.SectionDataPoint property) doc_parser (zensols.mimicsid.pred.SectionPredictor attribute) DOWNCASE (zensols.mimicsid.model.TokenType attribute) dump_ontology() (zensols.mimicsid.app.Application method) E EmptyPredictionError ents (zensols.mimicsid.model.SectionDataPoint property) exists() (zensols.mimicsid.anon.AnnotatedNoteStash method) F feature_dataframe (zensols.mimicsid.model.SectionDataPoint property) G get() (zensols.mimicsid.anon.NoteStash method) get_annotation() (zensols.mimicsid.anon.AnnotationResource method) H header_model_unpacker (zensols.mimicsid.pred.SectionPredictor attribute) headers (zensols.mimicsid.model.SectionDataPoint property) I idxs (zensols.mimicsid.model.SectionDataPoint property) installer (zensols.mimicsid.anon.AnnotationResource attribute) instance() (zensols.mimicsid.cli.ApplicationFactory class method) is_pred (zensols.mimicsid.model.SectionDataPoint property) J json (zensols.mimicsid.app.PredOutputType attribute) K keep_all (zensols.mimicsid.domain.SectionFilterType attribute) keep_classified (zensols.mimicsid.domain.SectionFilterType attribute) keep_non_empty (zensols.mimicsid.domain.SectionFilterType attribute) keys() (zensols.mimicsid.anon.AnnotatedNoteStash method) L load() (zensols.mimicsid.anon.AnnotatedNoteStash method) (zensols.mimicsid.anon.NoteStash method) M main() (in module zensols.mimicsid.cli) map_results() (zensols.mimicsid.model.SectionPredictionMapper method) mimic_pred_note_section (zensols.mimicsid.pred.PredictionNoteFactory attribute) MimicPredictedNote (class in zensols.mimicsid.domain) MimicSectionAssertError MimicSectionError min_section_body_len (zensols.mimicsid.pred.SectionPredictor attribute) MIX (zensols.mimicsid.model.TokenType attribute) model_config (zensols.mimicsid.pred.SectionPredictor attribute) module zensols.mimicsid zensols.mimicsid.anon zensols.mimicsid.app zensols.mimicsid.cli zensols.mimicsid.dapp zensols.mimicsid.domain zensols.mimicsid.model zensols.mimicsid.pred N name (zensols.mimicsid.pred.SectionPredictor attribute) newborn (zensols.mimicsid.domain.AgeType attribute) NEWLINE (zensols.mimicsid.model.TokenType attribute) note (zensols.mimicsid.model.SectionDataPoint attribute) note_counts_by_admission (zensols.mimicsid.anon.AnnotationResource property) note_counts_by_admission() (zensols.mimicsid.app.Application method) note_ids (zensols.mimicsid.anon.AnnotationResource property) note_stash (zensols.mimicsid.app.Application attribute) (zensols.mimicsid.app.PredictionApplication attribute) note_stash() (zensols.mimicsid.cli.ApplicationFactory class method) NoteStash (class in zensols.mimicsid.anon) O ontology (zensols.mimicsid.anon.AnnotationResource property) P pediatric (zensols.mimicsid.domain.AgeType attribute) pred_doc (zensols.mimicsid.model.SectionDataPoint attribute) predict() (zensols.mimicsid.pred.SectionPredictor method) predict_from_docs() (zensols.mimicsid.pred.SectionPredictor method) predict_sections() (zensols.mimicsid.app.PredictionApplication method) predicted_sections (zensols.mimicsid.domain.PredictedNote property) PredictedNote (class in zensols.mimicsid.domain) PredictionApplication (class in zensols.mimicsid.app) PredictionError PredictionNoteFactory (class in zensols.mimicsid.pred) PredOutputType (class in zensols.mimicsid.app) preempt_notes() (zensols.mimicsid.dapp.DistApplication method) preempt_stash (zensols.mimicsid.dapp.DistApplication attribute) prime() (zensols.mimicsid.anon.AnnotatedNoteStash method) (zensols.mimicsid.pred.PredictionNoteFactory method) (zensols.mimicsid.pred.SectionPredictor method) PUNCTUATION (zensols.mimicsid.model.TokenType attribute) R repredict() (zensols.mimicsid.app.PredictionApplication method) row_hadm_map_path (zensols.mimicsid.anon.AnnotatedNoteStash attribute) row_to_hadm_ids (zensols.mimicsid.anon.AnnotatedNoteStash property) S section_filter_type (zensols.mimicsid.pred.SectionPredictor attribute) section_id_model_unpacker (zensols.mimicsid.pred.SectionPredictor attribute) section_names (zensols.mimicsid.model.SectionDataPoint property) section_predictor (zensols.mimicsid.app.PredictionApplication attribute) (zensols.mimicsid.pred.PredictionNoteFactory property) section_predictor() (zensols.mimicsid.cli.ApplicationFactory class method) section_predictor_name (zensols.mimicsid.pred.PredictionNoteFactory attribute) SectionDataPoint (class in zensols.mimicsid.model) SectionFacade (class in zensols.mimicsid.model) SectionFilterType (class in zensols.mimicsid.domain) SectionPredictionMapper (class in zensols.mimicsid.model) SectionPredictor (class in zensols.mimicsid.pred) SEP (zensols.mimicsid.model.TokenType attribute) SPACE (zensols.mimicsid.model.TokenType attribute) suppress_warnings() (in module zensols.mimicsid) T text (zensols.mimicsid.app.PredOutputType attribute) (zensols.mimicsid.domain.PredictedNote property) TOKEN_TYPES (zensols.mimicsid.model.SectionDataPoint attribute) TokenType (class in zensols.mimicsid.model) truncted_text (zensols.mimicsid.domain.PredictedNote property) ttypes (zensols.mimicsid.model.SectionDataPoint property) U UPCASE (zensols.mimicsid.model.TokenType attribute) W write_admission() (zensols.mimicsid.app.Application method) write_fields() (zensols.mimicsid.domain.AnnotatedNote method) write_note() (zensols.mimicsid.app.Application method) Z zensols.mimicsid module zensols.mimicsid.anon module zensols.mimicsid.app module zensols.mimicsid.cli module zensols.mimicsid.dapp module zensols.mimicsid.domain module zensols.mimicsid.model module zensols.mimicsid.pred module